Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCACTTGTATGCCT
....(((((((((.((.(((((&)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001198533
GeneSymbolOXR1
Binding site2112,2129
Score0.846
Seed0
Au0.588
Energy-17.2
Binding len17
Me-10.403
Phylopstem6.305866555555556
Phylopflank5.715035832625
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure