Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAAAAAAGTGACAGCACCAATGCAGCTGCT
..(((((((((((((((((((&))))).........))))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001355256
GeneSymbolBRD3OS
Binding site5181,5215
Score0.846
Seed1
Au0.456
Energy-22.5
Binding len34
Me-4.957
Phylopstem0.4121265339393939
Phylopflank-0.24106480324999993
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure