Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTCTCAGCGGATGCAGCTGCAAC
(((((((((((((((..((..&))..))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198549
GeneSymbolNOL4
Binding site2398,2421
Score0.846
Seed1
Au0.529
Energy-23.1
Binding len23
Me-4.171
Phylopstem7.263222222222222
Phylopflank5.867254685000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure