Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTTCCCACTGCATTGTTACACCTCCCCCCTCACTTCAGGGCCAGGTA
(((((((..(((((((((....&.))))))))).......................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001355263
GeneSymbolNUTM2E
Binding site851,900
Score0.846
Seed1
Au0.441
Energy-21.8
Binding len41
Me-7.308
Phylopstem-0.3737883333333334
Phylopflank-0.16192920625
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end4
Position5UTR
2D Structure