Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTCCAGGAAGGAGAAGAAGCAGCATTGTAGCCAGT
..(((((.((((((((......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001355263
GeneSymbolNUTM2E
Binding site5943,5981
Score0.923
Seed0
Au0.412
Energy-18.8
Binding len15
Me-7.271
Phylopstem-0.18724405
Phylopflank-0.12199180349999997
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure