Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGACAAGTTGCTGCT
..(((((.((..(((((((((&)))))))))....)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198559
GeneSymbolDNAJC27
Binding site1294,1316
Score1.0
Seed0
Au0.603
Energy-21.6
Binding len22
Me-13.442
Phylopstem0.4895942111111111
Phylopflank0.5934487230000001
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure