Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGACACATTACAATGTCTGCAACAACCAGGAGCAGCTGCT
..((((((((((((((.....&.))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198588
GeneSymbolJMJD7-PLA2G4B
Binding site2790,2833
Score0.897
Seed1
Au0.412
Energy-23.3
Binding len20
Me-4.957
Phylopstem0.2511831944444445
Phylopflank1.0861406624999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure