Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGGGGCCACAGCCGCGGGGGCCACCACACTGGCCCAAATATTTCCTGCAGA
((((((((((((((((..(((&.)))))))))))))...........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198595
GeneSymbolSTON1
Binding site126,181
Score0.846
Seed1
Au0.485
Energy-22.9
Binding len48
Me-3.938
Phylopstem0.09838427209302324
Phylopflank0.5924006099999999
Longest consecutive pairings13
Position of longest consecutive pairings34
Pairings in 3prime end6
Position5UTR
2D Structure