Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAGCCCCATCATCATGCCCTACAAAGCTGCAC
.(((((((..(((((((((((&)))))))))))...................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198615
GeneSymbolMAP7
Binding site803,841
Score0.923
Seed1
Au0.529
Energy-22.7
Binding len38
Me-6.092
Phylopstem0.37714381818181814
Phylopflank0.7917239699999998
Longest consecutive pairings11
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure