Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGGTTAGCCAGGTC
(((((((..((..(((((....&))))).))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001198621
GeneSymbolXIRP1
Binding site2165,2183
Score0.846
Seed1
Au0.368
Energy-19.3
Binding len18
Me-11.944
Phylopstem0.3109118571428571
Phylopflank0.34743591875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure