Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGAGCTACAGACGGGGCCAGGG
.((((((......(((((.(((&.))))))))......)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001198621
GeneSymbolXIRP1
Binding site5052,5074
Score0.846
Seed1
Au0.456
Energy-18.3
Binding len22
Me-15.867
Phylopstem2.82205905
Phylopflank3.64136140375
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure