Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCCGCAGCTGCC
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198621
GeneSymbolXIRP1
Binding site3770,3783
Score0.923
Seed1
Au0.368
Energy-24.3
Binding len13
Me-5.925
Phylopstem0.6037416058333335
Phylopflank2.959177900875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure