Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAACAGCTGCTATAGCGCAGG
((((.(((((((((((.((((&))))...))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198624
GeneSymbolTNFSF13
Binding site600,626
Score0.846
Seed0
Au0.441
Energy-20.7
Binding len26
Me-8.057
Phylopstem2.2685275071428572
Phylopflank1.8318589412500002
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure