Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGTAGATTGACAGCTTTAACACTGCTGAATGCCAGGTT
(((((((((.((..((((....&.)))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001198626
GeneSymbolRUNX1T1
Binding site3925,3966
Score1.0
Seed1
Au0.618
Energy-19.4
Binding len18
Me-7.326
Phylopstem4.8473807777777775
Phylopflank3.805285373750001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure