Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGTAGATTGACAGCTTTAACACTGCTGAATGCCAGGTT
(((((((((.((..((((....&.)))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001198627
GeneSymbolRUNX1T1
Binding site3985,4026
Score0.846
Seed1
Au0.618
Energy-19.4
Binding len18
Me-7.326
Phylopstem1.3402114777777778
Phylopflank4.4894250575
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure