Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTACCCTGCAGCAGTTTGGCAAT
(((((((((((((.((((((.&)))))).))).....))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198628
GeneSymbolRUNX1T1
Binding site580,608
Score0.923
Seed1
Au0.544
Energy-20.5
Binding len28
Me-4.794
Phylopstem0.17530853000000002
Phylopflank-0.253046238125
Longest consecutive pairings6
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure