Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTACCCTGCAGCAGTTTGGCAAT
(((((((((((((.((((((.&)))))).))).....))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198632
GeneSymbolRUNX1T1
Binding site665,693
Score0.846
Seed1
Au0.544
Energy-20.5
Binding len28
Me-4.794
Phylopstem-0.643807785
Phylopflank-0.24270424312499989
Longest consecutive pairings6
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure