Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGACCCAGTTGCAC
.((((((((.((((....(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198632
GeneSymbolRUNX1T1
Binding site1537,1555
Score1.0
Seed1
Au0.412
Energy-19.4
Binding len18
Me-6.004
Phylopstem6.399399999999999
Phylopflank4.0786806828749995
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure