Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTACCCTGCAGCAGTTTGGCAAT
(((((((((((((.((((((.&)))))).))).....))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198633
GeneSymbolRUNX1T1
Binding site827,855
Score0.923
Seed1
Au0.544
Energy-20.5
Binding len28
Me-4.794
Phylopstem0.4571066000000001
Phylopflank-0.11344417912499999
Longest consecutive pairings6
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure