Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACATTCTTGTAATATCTTTGCCAGGTT
(((((((((((((((((((...&)))))))...)))).......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001198644
GeneSymbolTRIM6
Binding site2172,2202
Score0.923
Seed1
Au0.735
Energy-18.5
Binding len30
Me-3.938
Phylopstem4.623519731034483
Phylopflank4.6620885
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure