Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAACTGTGTAATTCCTATGACCCTGCGT
.(((((..((((((((((((.&))))))))))))...............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198645
GeneSymbolTRIM6
Binding site1178,1211
Score1.0
Seed0
Au0.588
Energy-19.8
Binding len33
Me-7.651
Phylopstem0.3950405166666666
Phylopflank0.6626267149999998
Longest consecutive pairings12
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure