Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCACTGCCGCAGCTC
....(((((((((.((.((((&)))).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198665
GeneSymbolARHGEF12
Binding site6672,6690
Score0.846
Seed0
Au0.412
Energy-20.9
Binding len18
Me-10.403
Phylopstem0.7452820777777779
Phylopflank0.99638894125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure