Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGCTTTGCTTATTTTTTAAAAACTATTGAGGTAAAGGGTTA
.((((((((((((.(((((..&)))))))))..))..........................)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001355281
GeneSymbolNANOGP8
Binding site1788,1834
Score0.846
Seed1
Au0.735
Energy-20.5
Binding len46
Me-4.65
Phylopstem0.03430378000000001
Phylopflank-0.19176432749999994
Longest consecutive pairings9
Position of longest consecutive pairings37
Pairings in 3prime end5
Position3UTR
2D Structure