Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCTCCAGCAGATGCAAG
(((((.(((((((((..((((&)))))))))....)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001355281
GeneSymbolNANOGP8
Binding site540,564
Score0.808
Seed0
Au0.515
Energy-19.8
Binding len24
Me-6.072
Phylopstem0.5505496307692309
Phylopflank0.28790340000000003
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure