Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGGAGGCGCGGTTGCAGT
(((((((((((.((.(..(((&)))..).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198721
GeneSymbolPRR5
Binding site437,459
Score0.846
Seed1
Au0.368
Energy-22.7
Binding len22
Me-8.02
Phylopstem-0.14263827272727275
Phylopflank-0.3027686625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure