Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCACATGAGCATGACTGAGGAGCAGCTGCAGCTGCT
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198774
GeneSymbolPI4KB
Binding site2456,2492
Score1.0
Seed1
Au0.426
Energy-27.4
Binding len16
Me-4.957
Phylopstem6.054986657142857
Phylopflank5.62982925
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure