Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCACCTCCAGTGGCTGTGAC
((((((((((((..((.((((&))))..))..)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198780
GeneSymbolARPC4
Binding site928,952
Score0.923
Seed1
Au0.603
Energy-18.6
Binding len24
Me-6.084
Phylopstem1.8115767692307694
Phylopflank1.72592536625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure