Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCTGCCATGGCAGCTGCT
..(((((((((((.((((((.&)))))).)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198786
GeneSymbolPOU2F1
Binding site1655,1677
Score0.808
Seed1
Au0.426
Energy-25.3
Binding len22
Me-5.814
Phylopstem6.023893714285713
Phylopflank4.793499585
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure