Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATGGAGGGAGGCTGACCTCAGCTGGAAG
((.((((((.(((((((((((&)))))))...........)))).)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198801
GeneSymbolEIF4G3
Binding site4858,4891
Score1.0
Seed0
Au0.485
Energy-22.1
Binding len33
Me-6.738
Phylopstem1.454189709090909
Phylopflank1.5483791349999998
Longest consecutive pairings7
Position of longest consecutive pairings26
Pairings in 3prime end8
PositionCDS
2D Structure