Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGCGCCTCGCCGGCCCCTCCCCCGGTCGCCGCGGCTGCC
..(((((((((((.....((.&.))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198807
GeneSymbolMSANTD3
Binding site194,236
Score0.846
Seed1
Au0.162
Energy-24.4
Binding len19
Me-6.782
Phylopstem2.1251800909090908
Phylopflank2.3741736862500002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure