Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCCAGCTCAAGCAAG
(((((((((.(((((((....&))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198818
GeneSymbolA1CF
Binding site1876,1896
Score0.923
Seed1
Au0.441
Energy-20.4
Binding len20
Me-5.18
Phylopstem-0.44314324999999993
Phylopflank-0.38275149375000006
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure