Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGCTAGTCATTATTATGCCAGGTT
((((((((((............&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001198819
GeneSymbolA1CF
Binding site7783,7808
Score0.923
Seed1
Au0.544
Energy-16.6
Binding len12
Me-13.224
Phylopstem4.4848945
Phylopflank5.52290441625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure