Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGGGCGGCCGTGGCTATTTGGCAT
.(((((((((((((((..(((&)))..)))))))))))).....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198819
GeneSymbolA1CF
Binding site1560,1586
Score0.846
Seed1
Au0.368
Energy-21.7
Binding len26
Me-3.793
Phylopstem0.4257658449999999
Phylopflank-0.260258395
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure