Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCCAGCTCAAGCAAG
(((((((((.(((((((....&))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198819
GeneSymbolA1CF
Binding site2043,2063
Score1.0
Seed1
Au0.441
Energy-20.4
Binding len20
Me-5.18
Phylopstem0.1751159833333333
Phylopflank-0.27324959375
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure