Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTGGAGGTGCAGCTGCAGG
(((((((((((.((.((((((&))).))).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198832
GeneSymbolPDE4DIP
Binding site3269,3292
Score1.0
Seed1
Au0.397
Energy-26.4
Binding len23
Me-8.02
Phylopstem1.3899282727272728
Phylopflank3.0906270512500003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure