Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTGCCTCCTGCGGCTGTT
..((((((((((..(((((((&))))..)))..)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198843
GeneSymbolRBM4
Binding site770,793
Score0.923
Seed1
Au0.412
Energy-21.7
Binding len23
Me-7.103
Phylopstem0.8215536636363635
Phylopflank0.8875363997499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure