Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTACTTCGGAAGCATGTCCCACCCCATGCTAGATCCAGCTGCAT
.((((((((.(((((((.(((&.)))...)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198844
GeneSymbolRBM4
Binding site1287,1334
Score0.923
Seed1
Au0.603
Energy-19.7
Binding len25
Me-5.036
Phylopstem0.1521534375
Phylopflank0.5236135925000001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure