Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCAGCATCCGCAGCG
.....(((((((.(((..(((&)))...))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198850
GeneSymbolFOXJ3
Binding site1441,1459
Score0.846
Seed0
Au0.353
Energy-20.6
Binding len18
Me-14.955
Phylopstem1.1194314285714286
Phylopflank0.3014186528125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure