Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGCCGCGTTGCGGG
(((((((.((((((((..(((&)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198851
GeneSymbolFOXJ3
Binding site12,31
Score1.0
Seed1
Au0.4
Energy-24.1
Binding len19
Me-6.251
Phylopstem4.73497125
Phylopflank4.403144375
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure