Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCGGGAGACCGGGGCGATTGGGCAGGAGCGGGTGG
((((.(((((((((((((((((&))))))))))).................)))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001355437
GeneSymbolSPTB
Binding site5369,5409
Score0.923
Seed0
Au0.368
Energy-29.6
Binding len40
Me-8.057
Phylopstem4.452311423529413
Phylopflank4.665348932499999
Longest consecutive pairings11
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure