Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGCACTGCAAGCTGTG
..((((((((((.((((((((&)))).))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198858
GeneSymbolHLA-DQB2
Binding site950,971
Score1.0
Seed1
Au0.397
Energy-22.1
Binding len21
Me-6.246
Phylopstem-0.9461910909090908
Phylopflank0.01222261962499996
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure