Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGCCACCCCAGCTGCAAG
(((((((((.(((.((..(((&)))..)).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198868
GeneSymbolCAPN1
Binding site2257,2279
Score1.0
Seed1
Au0.353
Energy-23.4
Binding len22
Me-6.037
Phylopstem0.7921455555555555
Phylopflank-0.0825515375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure