Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGCCAGGATTATGAGCAGCTGCGGGTGCGAT
(((((.((((((((((.....&.)))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198869
GeneSymbolCAPN1
Binding site160,196
Score1.0
Seed0
Au0.397
Energy-24.2
Binding len18
Me-5.839
Phylopstem1.17763851
Phylopflank0.71987311375
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure