Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGCCACCCCAGCTGCAAG
(((((((((.(((.((..(((&)))..)).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198869
GeneSymbolCAPN1
Binding site2269,2291
Score0.923
Seed1
Au0.353
Energy-23.4
Binding len22
Me-6.037
Phylopstem3.6471948888888885
Phylopflank1.4004444650000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure