Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGGGCCACAGCTGCC
..(((((((.((((...((((&))))..)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198879
GeneSymbolATP5MF-PTCD1
Binding site3840,3859
Score0.846
Seed1
Au0.338
Energy-22.7
Binding len19
Me-7.168
Phylopstem5.310687857142857
Phylopflank2.2110806800000002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure