Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCAATGCGGCTGTG
..((((((((.((((..((((&))))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198900
GeneSymbolYY1AP1
Binding site1950,1969
Score0.923
Seed1
Au0.412
Energy-22.5
Binding len19
Me-8.015
Phylopstem2.580243125
Phylopflank1.99359765625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure