Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCAATGCGGCTGTG
..((((((((.((((..((((&))))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198901
GeneSymbolYY1AP1
Binding site1811,1830
Score0.923
Seed1
Au0.412
Energy-22.5
Binding len19
Me-8.015
Phylopstem4.1807155
Phylopflank2.642572809999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure