Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCAATGCGGCTGTG
..((((((((.((((..((((&))))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198902
GeneSymbolYY1AP1
Binding site1860,1879
Score0.923
Seed1
Au0.412
Energy-22.5
Binding len19
Me-8.015
Phylopstem2.22463425
Phylopflank2.5163282625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure