Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCAATGCGGCTGTG
..((((((((.((((..((((&))))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198903
GeneSymbolYY1AP1
Binding site2330,2349
Score0.923
Seed1
Au0.412
Energy-22.5
Binding len19
Me-8.015
Phylopstem2.9644595000000002
Phylopflank2.25872977375
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure