Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGCAACTGGGGCTCTTGAGCAGC
((((((((.((((((((((((&)))))))))))).)))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198905
GeneSymbolYY1AP1
Binding site2567,2594
Score1.0
Seed1
Au0.485
Energy-21.6
Binding len27
Me-4.994
Phylopstem0.6961336666666665
Phylopflank1.020868549025
Longest consecutive pairings12
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure